Difference between revisions of "SJ18398"

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(Created page with "Category:gene == Gene SJ01083 == * transcription-direction: ** negative * right-end-position: ** 43687 * left-end-position: ** 29076 * centisome-position: ** 18.686615...")
(Created page with "Category:gene == Gene SJ22557 == * transcription-direction: ** positive * right-end-position: ** 77037 * left-end-position: ** 66874 * centisome-position: ** 38.57322...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ01083 ==
+
== Gene SJ22557 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 43687
+
** 77037
 
* left-end-position:
 
* left-end-position:
−
** 29076
+
** 66874
 
* centisome-position:
 
* centisome-position:
−
** 18.686615    
+
** 38.57322    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ANTHRANSYN-RXN]]
+
* [[2.7.11.25-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[IGPSYN-RXN]]
+
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[PRAISOM-RXN]]
+
{{#set: transcription-direction=positive}}
−
** Category: [[annotation]]
+
{{#set: right-end-position=77037}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=66874}}
−
** Category: [[orthology]]
+
{{#set: centisome-position=38.57322   }}
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: nb reaction associated=2}}
−
== Pathway(s) associated ==
 
−
* [[PWY-5958]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[TRPSYN-PWY]]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6661]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6660]]
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=43687}}
 
−
{{#set: left-end-position=29076}}
 
−
{{#set: centisome-position=18.686615   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=3}}
 
−
{{#set: nb pathway associated=4}}
 

Revision as of 14:52, 5 January 2021

Gene SJ22557

  • transcription-direction:
    • positive
  • right-end-position:
    • 77037
  • left-end-position:
    • 66874
  • centisome-position:
    • 38.57322

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18398&oldid=58157"