Difference between revisions of "SJ18425"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GDP GDP] == * common-name: ** gdp * smiles: ** c(op(=o)([o-])op(=o)([o-])[o-])c1(oc(c(o)c(o)1)n...")
(Created page with "Category:gene == Gene SJ01365 == * transcription-direction: ** negative * right-end-position: ** 13283 * left-end-position: ** 2558 * centisome-position: ** 1.6807938...")
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GDP GDP] ==
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== Gene SJ01365 ==
* common-name:
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* transcription-direction:
** gdp
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** negative
* smiles:
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* right-end-position:
** c(op(=o)([o-])op(=o)([o-])[o-])c1(oc(c(o)c(o)1)n3(c=nc2(c(=o)nc(n)=nc=23)))
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** 13283
* inchi-key:
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* left-end-position:
** qgwndrxfnxrzmb-uuokfmhzsa-k
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** 2558
* molecular-weight:
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* centisome-position:
** 440.179
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** 1.6807938   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[2.4.1.221-RXN]]
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* [[S.japonica_sterols_curated]]
* [[ATGD]]
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== Reaction(s) associated ==
* [[DGOTO]]
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
* [[GBDP]]
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** Category: [[annotation]]
* [[GDPKIN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[GDPPYPHOSKIN-RXN]]
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== Pathway(s) associated ==
* [[GDPREDUCT-RXN]]
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* [[PWY-7511]]
* [[GTPOP]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
* [[GUANOSINE-DIPHOSPHATASE-RXN]]
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{{#set: transcription-direction=negative}}
* [[MANNPGUANYLTRANGDP-RXN]]
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{{#set: right-end-position=13283}}
* [[RXN-12486]]
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{{#set: left-end-position=2558}}
* [[RXN-14117]]
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{{#set: centisome-position=1.6807938    }}
* [[RXN-15268]]
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{{#set: organism associated=S.japonica_sterols_curated}}
* [[RXN0-748]]
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{{#set: nb reaction associated=1}}
* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
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{{#set: nb pathway associated=1}}
* [[SUCL_LPAREN_gdp_RPAREN_m]]
 
== Reaction(s) known to produce the compound ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* [[2.4.1.142-RXN]]
 
* [[2.4.1.221-RXN]]
 
* [[2.4.1.68-RXN]]
 
* [[2.4.1.83-RXN]]
 
* [[ADENYLOSUCCINATE-SYNTHASE-RXN]]
 
* [[AGPT]]
 
* [[ALGINATE-SYNTHASE-RXN]]
 
* [[FE2GTPabc]]
 
* [[GALACTOSIDE-2-L-FUCOSYLTRANSFERASE-RXN]]
 
* [[GALACTOSIDE-3-FUCOSYLTRANSFERASE-RXN]]
 
* [[GBDP]]
 
* [[GTCY]]
 
* [[GTUP]]
 
* [[GUANYL-KIN-RXN]]
 
* [[MANNPGUANYLTRANGDP-RXN]]
 
* [[PPGPPSYN-RXN]]
 
* [[RXN-12486]]
 
* [[RXN-15268]]
 
* [[RXN-16602]]
 
* [[RXN-5462]]
 
* [[RXN-5463]]
 
* [[RXN-5464]]
 
* [[RXN-8988]]
 
* [[RXN-9463]]
 
* [[RXN0-5462]]
 
* [[RXNQT-4141]]
 
* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
 
* [[SUCL_LPAREN_gdp_RPAREN_m]]
 
* [[URKI-RXN]]
 
</div>
 
== Reaction(s) of unknown directionality ==
 
{{#set: common-name=gdp}}
 
{{#set: inchi-key=inchikey=qgwndrxfnxrzmb-uuokfmhzsa-k}}
 
{{#set: molecular-weight=440.179}}
 

Revision as of 20:22, 18 December 2020

Gene SJ01365

  • transcription-direction:
    • negative
  • right-end-position:
    • 13283
  • left-end-position:
    • 2558
  • centisome-position:
    • 1.6807938

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway