Difference between revisions of "SJ18427"

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(Created page with "Category:gene == Gene SJ12026 == * transcription-direction: ** positive * right-end-position: ** 309926 * left-end-position: ** 293325 * centisome-position: ** 80.97778...")
(Created page with "Category:gene == Gene SJ16864 == * transcription-direction: ** positive * right-end-position: ** 191161 * left-end-position: ** 184418 * centisome-position: ** 66.86609...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12026 ==
+
== Gene SJ16864 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 309926
+
** 191161
 
* left-end-position:
 
* left-end-position:
−
** 293325
+
** 184418
 
* centisome-position:
 
* centisome-position:
−
** 80.97778    
+
** 66.86609    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[1TRANSKETO-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2-OCTAPRENYL-6-OHPHENOL-METHY-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[2.1.1.64-RXN]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[2TRANSKETO-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[DHHB-METHYLTRANSFER-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN-11758]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12160]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9225]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9229]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9233]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9237]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9240]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN3O-102]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[P124-PWY]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
* [[PWY-6708]]
−
* [[CALVIN-PWY]]
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-5856]]
−
* [[P185-PWY]]
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-5871]]
−
* [[PWY-1861]]
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-5870]]
−
* [[P21-PWY]]
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-5855]]
−
* [[NONOXIPENT-PWY]]
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-5873]]
−
* [[PWY-5723]]
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY-5857]]
−
* [[PWY-6901]]
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
** '''10''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-5872]]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY3O-19]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7233]]
 +
** '''3''' reactions found over '''n.a''' reactions in the full pathway
 +
* [[PWY-7230]]
 +
** '''3''' reactions found over '''9''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=309926}}
+
{{#set: right-end-position=191161}}
−
{{#set: left-end-position=293325}}
+
{{#set: left-end-position=184418}}
−
{{#set: centisome-position=80.97778   }}
+
{{#set: centisome-position=66.86609   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=11}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=11}}

Revision as of 08:23, 15 March 2021

Gene SJ16864

  • transcription-direction:
    • positive
  • right-end-position:
    • 191161
  • left-end-position:
    • 184418
  • centisome-position:
    • 66.86609

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6708
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-5856
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5871
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5870
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-5855
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5873
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5857
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5872
    • 3 reactions found over 9 reactions in the full pathway
  • PWY3O-19
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7233
    • 3 reactions found over n.a reactions in the full pathway
  • PWY-7230
    • 3 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18427&oldid=123340"