Difference between revisions of "SJ18445"

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(Created page with "Category:gene == Gene SJ11169 == * transcription-direction: ** negative * right-end-position: ** 152638 * left-end-position: ** 149960 * centisome-position: ** 39.695583...")
(Created page with "Category:gene == Gene SJ07984 == * transcription-direction: ** positive * right-end-position: ** 316881 * left-end-position: ** 287971 * centisome-position: ** 64.61950...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11169 ==
+
== Gene SJ07984 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 152638
+
** 316881
 
* left-end-position:
 
* left-end-position:
−
** 149960
+
** 287971
 
* centisome-position:
 
* centisome-position:
−
** 39.695583    
+
** 64.61950    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
* [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ENOYL-COA-DELTA-ISOM-RXN]]
+
* [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12519]]
+
* [[RXN-16030]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13721]]
+
* [[RXN-16121]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-6384]]
+
* [[RXN-17730]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7836]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-7931]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[VALDEG-PWY]]
+
* [[TRIGLSYN-PWY]]
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5137]]
+
* [[PWY-6453]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[FAO-PWY]]
+
* [[PWY-7782]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''11''' reactions found over '''16''' reactions in the full pathway
−
* [[PWY-6837]]
+
{{#set: transcription-direction=positive}}
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
{{#set: right-end-position=316881}}
−
* [[PWY-3941]]
+
{{#set: left-end-position=287971}}
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
{{#set: centisome-position=64.61950   }}
−
* [[PWY-7574]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5138]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7291]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=152638}}
 
−
{{#set: left-end-position=149960}}
 
−
{{#set: centisome-position=39.695583   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=3}}

Revision as of 09:26, 27 August 2019

Gene SJ07984

  • transcription-direction:
    • positive
  • right-end-position:
    • 316881
  • left-end-position:
    • 287971
  • centisome-position:
    • 64.61950

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-6453
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18445&oldid=30866"