Difference between revisions of "SJ18449"

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(Created page with "Category:gene == Gene SJ10093 == * transcription-direction: ** positive * right-end-position: ** 31797 * left-end-position: ** 6438 * centisome-position: ** 19.32811 =...")
(Created page with "Category:gene == Gene SJ18449 == * transcription-direction: ** negative * right-end-position: ** 352470 * left-end-position: ** 344988 * centisome-position: ** 53.214664...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10093 ==
+
== Gene SJ18449 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 31797
+
** 352470
 
* left-end-position:
 
* left-end-position:
−
** 6438
+
** 344988
 
* centisome-position:
 
* centisome-position:
−
** 19.32811    
+
** 53.214664    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ASPARTATEKIN-RXN]]
+
* [[1.2.4.4-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[2KETO-3METHYLVALERATE-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[KETOISOCAPROATE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[METHYLVALERATE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5097]]
+
* [[PWY-5046]]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6559]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[P101-PWY]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[DAPLYSINESYN-PWY]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2941]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2942]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6562]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7153]]
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[HOMOSERSYN-PWY]]
 
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-5108]]
−
{{#set: right-end-position=31797}}
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
{{#set: left-end-position=6438}}
+
* [[ILEUDEG-PWY]]
−
{{#set: centisome-position=19.32811   }}
+
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=352470}}
 +
{{#set: left-end-position=344988}}
 +
{{#set: centisome-position=53.214664   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:07, 18 March 2021

Gene SJ18449

  • transcription-direction:
    • negative
  • right-end-position:
    • 352470
  • left-end-position:
    • 344988
  • centisome-position:
    • 53.214664

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5046
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5108
    • 2 reactions found over 3 reactions in the full pathway
  • ILEUDEG-PWY
    • 5 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18449&oldid=134774"