Difference between revisions of "SJ18504"

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(Created page with "Category:gene == Gene SJ19160 == * transcription-direction: ** positive * right-end-position: ** 339635 * left-end-position: ** 322294 * centisome-position: ** 50.373154...")
(Created page with "Category:gene == Gene SJ18504 == * transcription-direction: ** negative * right-end-position: ** 94857 * left-end-position: ** 74919 * centisome-position: ** 30.78475...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19160 ==
+
== Gene SJ18504 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 339635
+
** 94857
 
* left-end-position:
 
* left-end-position:
−
** 322294
+
** 74919
 
* centisome-position:
 
* centisome-position:
−
** 50.373154    
+
** 30.78475    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-15559]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2.3.1.42-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15560]]
+
* [[RXN-10462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
+
* [[RXN-13805]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-1381]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15044]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15045]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16024]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-16117]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17016]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17017]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17018]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7511]]
+
* [[PWY-7782]]
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
** '''11''' reactions found over '''16''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY0-1319]]
−
{{#set: right-end-position=339635}}
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
{{#set: left-end-position=322294}}
+
* [[TRIGLSYN-PWY]]
−
{{#set: centisome-position=50.373154   }}
+
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5667]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7411]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7587]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6453]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=94857}}
 +
{{#set: left-end-position=74919}}
 +
{{#set: centisome-position=30.78475   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=11}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:10, 18 March 2021

Gene SJ18504

  • transcription-direction:
    • negative
  • right-end-position:
    • 94857
  • left-end-position:
    • 74919
  • centisome-position:
    • 30.78475

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway
  • PWY0-1319
    • 4 reactions found over 4 reactions in the full pathway
  • TRIGLSYN-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-5667
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7411
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7587
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6453
    • 3 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18504&oldid=136140"