Difference between revisions of "SJ18541"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BENZENE-NO2 BENZENE-NO2] == * common-name: ** nitrobenzene * smiles: ** c1(=cc=c(c=c1)[n+]([o-]...")
(Created page with "Category:gene == Gene SJ18541 == * transcription-direction: ** positive * right-end-position: ** 145855 * left-end-position: ** 135008 * centisome-position: ** 55.630047...")
 
(8 intermediate revisions by 4 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BENZENE-NO2 BENZENE-NO2] ==
+
== Gene SJ18541 ==
−
* common-name:
+
* transcription-direction:
−
** nitrobenzene
+
** positive
−
* smiles:
+
* right-end-position:
−
** c1(=cc=c(c=c1)[n+]([o-])=o)
+
** 145855
−
* inchi-key:
+
* left-end-position:
−
** lqnuzadurlcdlv-uhfffaoysa-n
+
** 135008
−
* molecular-weight:
+
* centisome-position:
−
** 123.111
+
** 55.630047   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
* [[RXN-3661]]
+
* [[S.japonica_carotenoid_curated]]
−
== Reaction(s) known to produce the compound ==
+
== Reaction(s) associated ==
−
== Reaction(s) of unknown directionality ==
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=nitrobenzene}}
+
* [[ASPCARBTRANS-RXN]]
−
{{#set: inchi-key=inchikey=lqnuzadurlcdlv-uhfffaoysa-n}}
+
** Category: [[orthology]]
−
{{#set: molecular-weight=123.111}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[ORNCARBAMTRANSFER-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-13482]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-9]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-5686]]
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7790]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7791]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-4984]]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[CITRULLINE-DEG-PWY]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[ARGSYNBSUB-PWY]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7400]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[ARGSYN-PWY]]
 +
** '''5''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-4981]]
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 +
* [[CITRULBIO-PWY]]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=145855}}
 +
{{#set: left-end-position=135008}}
 +
{{#set: centisome-position=55.630047    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=4}}
 +
{{#set: nb pathway associated=11}}

Latest revision as of 11:04, 18 March 2021

Gene SJ18541

  • transcription-direction:
    • positive
  • right-end-position:
    • 145855
  • left-end-position:
    • 135008
  • centisome-position:
    • 55.630047

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5686
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7790
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7791
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-4984
    • 5 reactions found over 5 reactions in the full pathway
  • CITRULLINE-DEG-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • ARGSYNBSUB-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7400
    • 7 reactions found over 9 reactions in the full pathway
  • ARGSYN-PWY
    • 5 reactions found over 4 reactions in the full pathway
  • PWY-4981
    • 3 reactions found over 2 reactions in the full pathway
  • CITRULBIO-PWY
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-5
    • 3 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18541&oldid=133231"