Difference between revisions of "SJ18614"
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(Created page with "Category:gene == Gene SJ09730 == * transcription-direction: ** positive * right-end-position: ** 590510 * left-end-position: ** 572324 * centisome-position: ** 70.422195...") |
(Created page with "Category:gene == Gene SJ22044 == * transcription-direction: ** negative * right-end-position: ** 58339 * left-end-position: ** 42467 * centisome-position: ** 23.374228...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ22044 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 58339 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 42467 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 23.374228 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[MANNPISOM-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | == Pathway(s) associated == |
| − | {{#set: right-end-position= | + | * [[PWY-3861]] |
| − | {{#set: left-end-position= | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: centisome-position= | + | * [[PWY-5659]] |
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-7586]] | ||
| + | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-7456]] | ||
| + | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-6992]] | ||
| + | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-882]] | ||
| + | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-3881]] | ||
| + | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[MANNCAT-PWY]] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=58339}} | ||
| + | {{#set: left-end-position=42467}} | ||
| + | {{#set: centisome-position=23.374228 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
| + | {{#set: nb pathway associated=8}} | ||
Revision as of 18:50, 14 January 2021
Contents
Gene SJ22044
- transcription-direction:
- negative
- right-end-position:
- 58339
- left-end-position:
- 42467
- centisome-position:
- 23.374228
Organism(s) associated with this gene
Reaction(s) associated
- MANNPISOM-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-3861
- 2 reactions found over 4 reactions in the full pathway
- PWY-5659
- 3 reactions found over 4 reactions in the full pathway
- PWY-7586
- 2 reactions found over 3 reactions in the full pathway
- PWY-7456
- 2 reactions found over 7 reactions in the full pathway
- PWY-6992
- 4 reactions found over 5 reactions in the full pathway
- PWY-882
- 6 reactions found over 8 reactions in the full pathway
- PWY-3881
- 2 reactions found over 3 reactions in the full pathway
- MANNCAT-PWY
- 1 reactions found over 1 reactions in the full pathway
