Difference between revisions of "SJ18680"

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(Created page with "Category:gene == Gene SJ17412 == * transcription-direction: ** positive * right-end-position: ** 164770 * left-end-position: ** 157751 * centisome-position: ** 59.997795...")
(Created page with "Category:gene == Gene SJ18680 == * transcription-direction: ** negative * right-end-position: ** 88546 * left-end-position: ** 80853 * centisome-position: ** 33.818527...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ17412 ==
+
== Gene SJ18680 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 164770
+
** 88546
 
* left-end-position:
 
* left-end-position:
** 157751
+
** 80853
 
* centisome-position:
 
* centisome-position:
** 59.997795    
+
** 33.818527    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.1.4.17-RXN]]
* [[1.4.3.19-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-11319]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[35-CYCLIC-GMP-PHOSPHODIESTERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-12614]]
+
{{#set: transcription-direction=negative}}
** Category: [[annotation]]
+
{{#set: right-end-position=88546}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=80853}}
* [[RXN-17951]]
+
{{#set: centisome-position=33.818527   }}
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-8672]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-8673]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-8674]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[THIAZOLSYN2-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
== Pathway(s) associated ==
 
* [[PWY-7396]]
 
** '''4''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-6892]]
 
** '''5''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-6891]]
 
** '''4''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7806]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=164770}}
 
{{#set: left-end-position=157751}}
 
{{#set: centisome-position=59.997795   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=4}}
 

Latest revision as of 11:05, 18 March 2021

Gene SJ18680

  • transcription-direction:
    • negative
  • right-end-position:
    • 88546
  • left-end-position:
    • 80853
  • centisome-position:
    • 33.818527

Organism(s) associated with this gene

Reaction(s) associated