Difference between revisions of "SJ18682"

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(Created page with "Category:gene == Gene SJ04428 == * transcription-direction: ** positive * right-end-position: ** 51156 * left-end-position: ** 45678 * centisome-position: ** 42.653843...")
 
(Created page with "Category:gene == Gene SJ07228 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-8025 ** Category:...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ04428 ==
+
== Gene SJ07228 ==
* transcription-direction:
 
** positive
 
* right-end-position:
 
** 51156
 
* left-end-position:
 
** 45678
 
* centisome-position:
 
** 42.653843   
 
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[PEROXID-RXN]]
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* [[RXN-8025]]
** Category: [[annotation]]
+
** Category: [[manual]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
* [[RXN-14240]]
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* [[RXN-8026]]
** Category: [[annotation]]
+
** Category: [[manual]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
* [[RXN-15288]]
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* [[RXN1F-152]]
** Category: [[annotation]]
+
** Category: [[manual]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
* [[RXN-17352]]
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* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
** Category: [[annotation]]
+
** Category: [[orthology]]
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-8635]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7214]]
+
* [[PWY-7638]]
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
* [[PWY-7445]]
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* [[PWY-5944]]
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
* [[PWY-5466]]
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* [[PWY-5288]]
 
** '''2''' reactions found over '''10''' reactions in the full pathway
 
** '''2''' reactions found over '''10''' reactions in the full pathway
* [[PWY-6824]]
 
** '''2''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-5469]]
 
** '''2''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-5461]]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=51156}}
 
{{#set: left-end-position=45678}}
 
{{#set: centisome-position=42.653843    }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=4}}
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=3}}

Revision as of 14:21, 26 August 2019

Gene SJ07228

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7638
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-5944
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5288
    • 2 reactions found over 10 reactions in the full pathway