Difference between revisions of "SJ18694"
Jump to navigation
Jump to search
(Created page with "Category:gene == Gene SJ17050 == * transcription-direction: ** negative * right-end-position: ** 123866 * left-end-position: ** 95657 * centisome-position: ** 35.166203...") |
(Created page with "Category:gene == Gene SJ16244 == * transcription-direction: ** positive * right-end-position: ** 420284 * left-end-position: ** 403709 * centisome-position: ** 58.539093...") |
||
Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ16244 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 420284 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 403709 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 58.539093 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[3.1.4.11-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[PHOSPHOLIPASE-C-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | * [[RXN-13334]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[RXN-16261]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | * [[PWY-6351]] |
− | ** ''' | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
− | {{#set: transcription-direction= | + | * [[PWY-7039]] |
− | {{#set: right-end-position= | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
− | {{#set: left-end-position= | + | * [[LIPASYN-PWY]] |
− | {{#set: centisome-position= | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
+ | * [[PWY-6367]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: right-end-position=420284}} | ||
+ | {{#set: left-end-position=403709}} | ||
+ | {{#set: centisome-position=58.539093 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Revision as of 14:21, 26 August 2019
Contents
Gene SJ16244
- transcription-direction:
- positive
- right-end-position:
- 420284
- left-end-position:
- 403709
- centisome-position:
- 58.539093
Organism(s) associated with this gene
Reaction(s) associated
- 3.1.4.11-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- PHOSPHOLIPASE-C-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13334
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-16261
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6351
- 4 reactions found over 5 reactions in the full pathway
- PWY-7039
- 4 reactions found over 5 reactions in the full pathway
- LIPASYN-PWY
- 5 reactions found over 5 reactions in the full pathway
- PWY-6367
- 2 reactions found over 4 reactions in the full pathway