Difference between revisions of "SJ18751"
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(Created page with "Category:gene == Gene SJ11003 == * transcription-direction: ** negative * right-end-position: ** 1139626 * left-end-position: ** 1132730 * centisome-position: ** 78.41790...") |
(Created page with "Category:gene == Gene SJ10034 == * transcription-direction: ** positive * right-end-position: ** 327397 * left-end-position: ** 311304 * centisome-position: ** 38.30868...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ10034 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 327397 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 311304 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 38.30868 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | * [[METHIONINE--TRNA-LIGASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | + | * [[RXN-16165]] | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | ** Category: [[ | ||
| − | *** source: [[ | ||
| − | * [[RXN- | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY | + | * [[TRNA-CHARGING-PWY]] |
| − | ** ''' | + | ** '''21''' reactions found over '''21''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | {{#set: transcription-direction=positive}} |
| − | {{#set: right-end-position= | + | {{#set: right-end-position=327397}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=311304}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=38.30868 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
Revision as of 11:06, 15 January 2021
Contents
Gene SJ10034
- transcription-direction:
- positive
- right-end-position:
- 327397
- left-end-position:
- 311304
- centisome-position:
- 38.30868
Organism(s) associated with this gene
Reaction(s) associated
- METHIONINE--TRNA-LIGASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-16165
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- TRNA-CHARGING-PWY
- 21 reactions found over 21 reactions in the full pathway
