Difference between revisions of "SJ18779"

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(Created page with "Category:gene == Gene SJ18666 == * transcription-direction: ** positive * right-end-position: ** 228579 * left-end-position: ** 225561 * centisome-position: ** 94.00921...")
(Created page with "Category:gene == Gene SJ18779 == * transcription-direction: ** negative * right-end-position: ** 199786 * left-end-position: ** 177818 * centisome-position: ** 75.242355...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ18666 ==
+
== Gene SJ18779 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 228579
+
** 199786
 
* left-end-position:
 
* left-end-position:
−
** 225561
+
** 177818
 
* centisome-position:
 
* centisome-position:
−
** 94.00921    
+
** 75.242355    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PMPOXI-RXN]]
+
* [[1.1.1.34-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[PNPOXI-RXN]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PYRIDOXINE-4-OXIDASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12752]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-13142]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PLPSAL-PWY]]
+
* [[PWY-922]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7204]]
+
* [[PWY-6174]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PYRIDOXSYN-PWY]]
+
* [[PWY-7391]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''7''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-7282]]
+
* [[PWY-7524]]
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5499]]
+
{{#set: transcription-direction=negative}}
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=199786}}
−
* [[PWY-6938]]
+
{{#set: left-end-position=177818}}
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=75.242355   }}
−
{{#set: transcription-direction=positive}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: right-end-position=228579}}
+
{{#set: nb reaction associated=1}}
−
{{#set: left-end-position=225561}}
+
{{#set: nb pathway associated=4}}
−
{{#set: centisome-position=94.00921   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=5}}
 
−
{{#set: nb pathway associated=6}}
 

Latest revision as of 11:01, 18 March 2021

Gene SJ18779

  • transcription-direction:
    • negative
  • right-end-position:
    • 199786
  • left-end-position:
    • 177818
  • centisome-position:
    • 75.242355

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-922
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6174
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7391
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-7524
    • 5 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18779&oldid=131779"