Difference between revisions of "SJ18892"

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(Created page with "Category:gene == Gene SJ10687 == * transcription-direction: ** negative * right-end-position: ** 612156 * left-end-position: ** 587369 * centisome-position: ** 74.529564...")
(Created page with "Category:gene == Gene SJ18892 == * transcription-direction: ** positive * right-end-position: ** 14644 * left-end-position: ** 6553 * centisome-position: ** 2.7993984...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10687 ==
+
== Gene SJ18892 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 612156
+
** 14644
 
* left-end-position:
 
* left-end-position:
−
** 587369
+
** 6553
 
* centisome-position:
 
* centisome-position:
−
** 74.529564    
+
** 2.7993984    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[INORGPYROPHOSPHAT-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[DIENOYLCOAREDUCT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12521]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14715]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14776]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14790]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7835]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7911]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7805]]
+
* [[PWY-6837]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7807]]
+
* [[PWY-7307]]
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7337]]
−
{{#set: right-end-position=612156}}
+
** '''6''' reactions found over '''12''' reactions in the full pathway
−
{{#set: left-end-position=587369}}
+
* [[PWY-7338]]
−
{{#set: centisome-position=74.529564   }}
+
** '''6''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5138]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=14644}}
 +
{{#set: left-end-position=6553}}
 +
{{#set: centisome-position=2.7993984   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:04, 18 March 2021

Gene SJ18892

  • transcription-direction:
    • positive
  • right-end-position:
    • 14644
  • left-end-position:
    • 6553
  • centisome-position:
    • 2.7993984

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6837
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-7307
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7337
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-7338
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-5138
    • 4 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18892&oldid=133379"