Difference between revisions of "SJ18954"
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(Created page with "Category:gene == Gene SJ16649 == * transcription-direction: ** negative * right-end-position: ** 18734 * left-end-position: ** 5283 * centisome-position: ** 1.8987956...") |
(Created page with "Category:gene == Gene SJ18954 == * transcription-direction: ** positive * right-end-position: ** 218498 * left-end-position: ** 199765 * centisome-position: ** 31.189257...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ18954 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 218498 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 199765 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 31.189257 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | * [[6.3.5.6-RXN]] |
| − | ** Category: [[ | + | ** Category: [[orthology]] |
| − | *** source: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | * [[ | + | * [[ASPARAGINE--TRNA-LIGASE-RXN]] |
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | == Pathway(s) associated == |
| − | {{#set: right-end-position= | + | * [[PWY490-4]] |
| − | {{#set: left-end-position= | + | ** '''2''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: centisome-position= | + | * [[TRNA-CHARGING-PWY]] |
| + | ** '''21''' reactions found over '''21''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=218498}} | ||
| + | {{#set: left-end-position=199765}} | ||
| + | {{#set: centisome-position=31.189257 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| + | {{#set: nb pathway associated=2}} | ||
Latest revision as of 11:05, 18 March 2021
Contents
Gene SJ18954
- transcription-direction:
- positive
- right-end-position:
- 218498
- left-end-position:
- 199765
- centisome-position:
- 31.189257
Organism(s) associated with this gene
Reaction(s) associated
- 6.3.5.6-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- ASPARAGINE--TRNA-LIGASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY490-4
- 2 reactions found over 4 reactions in the full pathway
- TRNA-CHARGING-PWY
- 21 reactions found over 21 reactions in the full pathway
