Difference between revisions of "SJ18961"

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(Created page with "Category:gene == Gene SJ05075 == * transcription-direction: ** positive * right-end-position: ** 418804 * left-end-position: ** 410982 * centisome-position: ** 81.76126...")
 
(Created page with "Category:gene == Gene SJ06685 == * transcription-direction: ** positive * right-end-position: ** 45587 * left-end-position: ** 35836 * centisome-position: ** 46.975853...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05075 ==
+
== Gene SJ06685 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 418804
+
** 45587
 
* left-end-position:
 
* left-end-position:
−
** 410982
+
** 35836
 
* centisome-position:
 
* centisome-position:
−
** 81.76126    
+
** 46.975853    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[MALATE-DEH-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2.7.11.18-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ATPASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[MALATE-DEHYDROGENASE-NADP+-RXN]]
+
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7210]]
−
* [[PWY-6969]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-7198]]
−
* [[P23-PWY]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''9''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-7184]]
−
* [[FERMENTATION-PWY]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''11''' reactions found over '''16''' reactions in the full pathway
+
* [[PWY-6545]]
−
* [[GLYOXYLATE-BYPASS]]
 
−
** '''6''' reactions found over '''6''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-1622]]
 
−
** '''6''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-7383]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[P42-PWY]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5392]]
 
−
** '''6''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-5690]]
 
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7115]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[TCA]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-561]]
 
−
** '''6''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5913]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6728]]
 
−
** '''11''' reactions found over '''19''' reactions in the full pathway
 
−
* [[P105-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY66-398]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[P108-PWY]]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[MALATE-ASPARTATE-SHUTTLE-PWY]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-241]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7117]]
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=418804}}
+
{{#set: right-end-position=45587}}
−
{{#set: left-end-position=410982}}
+
{{#set: left-end-position=35836}}
−
{{#set: centisome-position=81.76126   }}
+
{{#set: centisome-position=46.975853   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=22}}
+
{{#set: nb pathway associated=4}}

Revision as of 14:22, 26 August 2019

Gene SJ06685

  • transcription-direction:
    • positive
  • right-end-position:
    • 45587
  • left-end-position:
    • 35836
  • centisome-position:
    • 46.975853

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ18961&oldid=19288"