Difference between revisions of "SJ18981"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14154 CPD-14154] == * common-name: ** tobramycin * smiles: ** c([n+])c1(c(cc(c(o1)oc2(c(c(c...")
(Created page with "Category:gene == Gene SJ18981 == * transcription-direction: ** positive * right-end-position: ** 212420 * left-end-position: ** 210462 * centisome-position: ** 90.223656...")
 
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14154 CPD-14154] ==
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== Gene SJ18981 ==
* common-name:
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* transcription-direction:
** tobramycin
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** positive
* smiles:
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* right-end-position:
** c([n+])c1(c(cc(c(o1)oc2(c(c(c([n+])cc([n+])2)oc3(oc(c(c(c(o)3)[n+])o)co))o))[n+])o)
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** 212420
* inchi-key:
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* left-end-position:
** nlvfbuxfdbbnbw-pbsuhmdjsa-s
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** 210462
* molecular-weight:
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* centisome-position:
** 472.558
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** 90.223656   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[RXN-13168]]
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* [[S.japonica_carotenoid_curated]]
* [[RXN-15284]]
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== Reaction(s) associated ==
== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
{{#set: common-name=tobramycin}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: inchi-key=inchikey=nlvfbuxfdbbnbw-pbsuhmdjsa-s}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
{{#set: molecular-weight=472.558}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
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{{#set: right-end-position=212420}}
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{{#set: left-end-position=210462}}
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{{#set: centisome-position=90.223656    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:03, 18 March 2021

Gene SJ18981

  • transcription-direction:
    • positive
  • right-end-position:
    • 212420
  • left-end-position:
    • 210462
  • centisome-position:
    • 90.223656

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway