Difference between revisions of "SJ19012"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ21798 == * transcription-direction: ** negative * right-end-position: ** 41506 * left-end-position: ** 24465 * centisome-position: ** 4.1395726...")
(Created page with "Category:gene == Gene SJ19012 == * transcription-direction: ** positive * right-end-position: ** 230108 * left-end-position: ** 216541 * centisome-position: ** 93.06786...")
 
(6 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21798 ==
+
== Gene SJ19012 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 41506
+
** 230108
 
* left-end-position:
 
* left-end-position:
−
** 24465
+
** 216541
 
* centisome-position:
 
* centisome-position:
−
** 4.1395726    
+
** 93.06786    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PPPGO]]
+
* [[3.3.2.10-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROTOPORGENOXI-RXN]]
+
* [[RXN-17589]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17617]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17622]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN1A0-6303]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-17517]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7159]]
+
* [[PWY-7778]]
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY0-1415]]
+
* [[PWY1A0-6325]]
−
** '''5''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''12''' reactions in the full pathway
−
* [[CHLOROPHYLL-SYN]]
+
{{#set: transcription-direction=positive}}
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=230108}}
−
* [[HEME-BIOSYNTHESIS-II]]
+
{{#set: left-end-position=216541}}
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=93.06786   }}
−
* [[PWY-7766]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
{{#set: nb reaction associated=5}}
−
{{#set: transcription-direction=negative}}
+
{{#set: nb pathway associated=2}}
−
{{#set: right-end-position=41506}}
 
−
{{#set: left-end-position=24465}}
 
−
{{#set: centisome-position=4.1395726   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=3}}
 
−
{{#set: nb pathway associated=5}}
 

Latest revision as of 11:07, 18 March 2021

Gene SJ19012

  • transcription-direction:
    • positive
  • right-end-position:
    • 230108
  • left-end-position:
    • 216541
  • centisome-position:
    • 93.06786

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7778
    • 3 reactions found over 8 reactions in the full pathway
  • PWY1A0-6325
    • 1 reactions found over 12 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19012&oldid=135071"