Difference between revisions of "SJ19061"

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(Created page with "Category:gene == Gene SJ20456 == * transcription-direction: ** negative * right-end-position: ** 1007019 * left-end-position: ** 996055 * centisome-position: ** 87.70306...")
(Created page with "Category:gene == Gene SJ19061 == * transcription-direction: ** positive * right-end-position: ** 44102 * left-end-position: ** 41486 * centisome-position: ** 17.889763...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ20456 ==
+
== Gene SJ19061 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 1007019
+
** 44102
 
* left-end-position:
 
* left-end-position:
** 996055
+
** 41486
 
* centisome-position:
 
* centisome-position:
** 87.70306    
+
** 17.889763    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RXN-13185]]
+
* [[RXN-15561]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-19202]]
+
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
** Category: [[manual]]
 
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
* [[RXN-7984]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-7985]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7949]]
+
* [[PWY-7511]]
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
* [[PWY-5945]]
+
{{#set: transcription-direction=positive}}
** '''4''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=44102}}
{{#set: transcription-direction=negative}}
+
{{#set: left-end-position=41486}}
{{#set: right-end-position=1007019}}
+
{{#set: centisome-position=17.889763   }}
{{#set: left-end-position=996055}}
 
{{#set: centisome-position=87.70306   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:08, 18 March 2021

Gene SJ19061

  • transcription-direction:
    • positive
  • right-end-position:
    • 44102
  • left-end-position:
    • 41486
  • centisome-position:
    • 17.889763

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway