Difference between revisions of "SJ19061"

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(Created page with "Category:gene == Gene SJ20456 == * transcription-direction: ** negative * right-end-position: ** 1007019 * left-end-position: ** 996055 * centisome-position: ** 87.70306...")
(Created page with "Category:gene == Gene SJ01391 == * transcription-direction: ** positive * right-end-position: ** 150684 * left-end-position: ** 142244 * centisome-position: ** 93.60498...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20456 ==
+
== Gene SJ01391 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 1007019
+
** 150684
 
* left-end-position:
 
* left-end-position:
−
** 996055
+
** 142244
 
* centisome-position:
 
* centisome-position:
−
** 87.70306    
+
** 93.60498    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-13185]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-19202]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
** Category: [[manual]]
 
−
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
 
−
* [[RXN-7984]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7985]]
+
* [[RXN-11109]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7949]]
+
* [[PWY-6545]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5945]]
+
* [[PWY-7210]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7198]]
−
{{#set: right-end-position=1007019}}
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
{{#set: left-end-position=996055}}
+
* [[PWY-7184]]
−
{{#set: centisome-position=87.70306   }}
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
{{#set: transcription-direction=positive}}
−
{{#set: nb reaction associated=4}}
+
{{#set: right-end-position=150684}}
−
{{#set: nb pathway associated=2}}
+
{{#set: left-end-position=142244}}
 +
{{#set: centisome-position=93.60498   }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=4}}

Revision as of 20:27, 18 December 2020

Gene SJ01391

  • transcription-direction:
    • positive
  • right-end-position:
    • 150684
  • left-end-position:
    • 142244
  • centisome-position:
    • 93.60498

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




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