Difference between revisions of "SJ19063"
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(Created page with "Category:gene == Gene SJ12433 == * transcription-direction: ** negative * right-end-position: ** 342378 * left-end-position: ** 331738 * centisome-position: ** 92.67408...") |
(Created page with "Category:gene == Gene SJ19063 == * transcription-direction: ** positive * right-end-position: ** 162150 * left-end-position: ** 136755 * centisome-position: ** 58.97205...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ19063 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 162150 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 136755 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 58.97205 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[RXN-13729]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN3DJ-11230]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[SGPL11]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7119]] |
| − | ** ''' | + | ** '''4''' reactions found over '''16''' reactions in the full pathway |
| − | * [[ | + | * [[PWY3DJ-11470]] |
| − | ** ''' | + | ** '''3''' reactions found over '''10''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | {{#set: transcription-direction=positive}} |
| − | {{#set: right-end-position= | + | {{#set: right-end-position=162150}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=136755}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=58.97205 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
{{#set: nb pathway associated=2}} | {{#set: nb pathway associated=2}} | ||
Latest revision as of 11:03, 18 March 2021
Contents
Gene SJ19063
- transcription-direction:
- positive
- right-end-position:
- 162150
- left-end-position:
- 136755
- centisome-position:
- 58.97205
Organism(s) associated with this gene
Reaction(s) associated
- RXN-13729
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN3DJ-11230
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- SGPL11
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7119
- 4 reactions found over 16 reactions in the full pathway
- PWY3DJ-11470
- 3 reactions found over 10 reactions in the full pathway
