Difference between revisions of "SJ19084"
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(Created page with "Category:gene == Gene SJ20196 == * transcription-direction: ** positive * right-end-position: ** 74977 * left-end-position: ** 67311 * centisome-position: ** 31.855656...") |
(Created page with "Category:gene == Gene SJ19084 == * transcription-direction: ** positive * right-end-position: ** 13980 * left-end-position: ** 2556 * centisome-position: ** 0.22404996...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ19084 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 13980 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 2556 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 0.22404996 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[RXN-15117]] |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | |||
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[RXN-5467]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-5469]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[ | + | * [[PWY-7817]] |
| − | + | ** '''6''' reactions found over '''16''' reactions in the full pathway | |
| − | + | * [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]] | |
| − | ** ''' | + | ** '''16''' reactions found over '''19''' reactions in the full pathway |
| − | |||
| − | |||
| − | |||
| − | |||
| − | * [[ | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | ** ''' | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=13980}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=2556}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=0.22404996 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=3}} | {{#set: nb reaction associated=3}} | ||
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ19084
- transcription-direction:
- positive
- right-end-position:
- 13980
- left-end-position:
- 2556
- centisome-position:
- 0.22404996
Organism(s) associated with this gene
Reaction(s) associated
- RXN-15117
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-5467
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-5469
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7817
- 6 reactions found over 16 reactions in the full pathway
- MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
- 16 reactions found over 19 reactions in the full pathway
