Difference between revisions of "SJ19088"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ12377 == * transcription-direction: ** positive * right-end-position: ** 83912 * left-end-position: ** 22104 * centisome-position: ** 6.150199...")
(Created page with "Category:gene == Gene SJ19088 == * transcription-direction: ** positive * right-end-position: ** 206262 * left-end-position: ** 192051 * centisome-position: ** 16.834515...")
 
(3 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12377 ==
+
== Gene SJ19088 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 83912
+
** 206262
 
* left-end-position:
 
* left-end-position:
−
** 22104
+
** 192051
 
* centisome-position:
 
* centisome-position:
−
** 6.150199    
+
** 16.834515    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEROXID-RXN]]
+
* [[APAPT]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-14240]]
+
* [[RXN0-5217]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-15288]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
+
* [[SPERMIDINESYN-RXN]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8635]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SPERMINE-SYNTHASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
* [[PWY0-1303]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7445]]
+
* [[BSUBPOLYAMSYN-PWY]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5466]]
+
* [[ARGSPECAT-PWY]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6824]]
+
* [[POLYAMINSYN3-PWY]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-5469]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5461]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=83912}}
+
{{#set: right-end-position=206262}}
−
{{#set: left-end-position=22104}}
+
{{#set: left-end-position=192051}}
−
{{#set: centisome-position=6.150199   }}
+
{{#set: centisome-position=16.834515   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:08, 18 March 2021

Gene SJ19088

  • transcription-direction:
    • positive
  • right-end-position:
    • 206262
  • left-end-position:
    • 192051
  • centisome-position:
    • 16.834515

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1303
    • 1 reactions found over 2 reactions in the full pathway
  • BSUBPOLYAMSYN-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • ARGSPECAT-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • POLYAMINSYN3-PWY
    • 4 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19088&oldid=135176"