Difference between revisions of "SJ19133"

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(Created page with "Category:gene == Gene SJ02830 == * transcription-direction: ** negative * right-end-position: ** 160507 * left-end-position: ** 153349 * centisome-position: ** 28.769245...")
(Created page with "Category:gene == Gene SJ19133 == * transcription-direction: ** negative * right-end-position: ** 953003 * left-end-position: ** 946750 * centisome-position: ** 82.98877...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02830 ==
+
== Gene SJ19133 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 160507
+
** 953003
 
* left-end-position:
 
* left-end-position:
−
** 153349
+
** 946750
 
* centisome-position:
 
* centisome-position:
−
** 28.769245    
+
** 82.98877    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.7.8.23-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[orthology]]
+
* [[RXN-12587]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[23-DIMETHYLMALATE-LYASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ISOCIT-CLEAV-RXN]]
+
* [[RXN-12588]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10827]]
+
* [[RXN-14382]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-10828]]
+
* [[RXN-14384]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14385]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14386]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15881]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9787]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-308]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SELENOCYSTEINE-LYASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5055]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-6892]]
−
* [[PWY-6969]]
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
** '''10''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-7250]]
−
* [[GLYOXYLATE-BYPASS]]
+
** '''5''' reactions found over '''10''' reactions in the full pathway
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
* [[PWY0-1021]]
−
* [[P105-PWY]]
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY-7892]]
−
* [[PWY-7769]]
+
** '''3''' reactions found over '''11''' reactions in the full pathway
−
** '''2''' reactions found over '''25''' reactions in the full pathway
+
* [[PWY-6891]]
−
* [[PWY-6322]]
+
** '''4''' reactions found over '''7''' reactions in the full pathway
−
** '''2''' reactions found over '''25''' reactions in the full pathway
+
* [[PWY-7904]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7891]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7889]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7888]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6823]]
 +
** '''7''' reactions found over '''6''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=160507}}
+
{{#set: right-end-position=953003}}
−
{{#set: left-end-position=153349}}
+
{{#set: left-end-position=946750}}
−
{{#set: centisome-position=28.769245   }}
+
{{#set: centisome-position=82.98877   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=10}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=10}}

Latest revision as of 11:04, 18 March 2021

Gene SJ19133

  • transcription-direction:
    • negative
  • right-end-position:
    • 953003
  • left-end-position:
    • 946750
  • centisome-position:
    • 82.98877

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6892
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7250
    • 5 reactions found over 10 reactions in the full pathway
  • PWY0-1021
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7892
    • 3 reactions found over 11 reactions in the full pathway
  • PWY-6891
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7904
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7891
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7889
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7888
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6823
    • 7 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19133&oldid=133589"