Difference between revisions of "SJ19146"

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(Created page with "Category:gene == Gene SJ09367 == * transcription-direction: ** positive * right-end-position: ** 440879 * left-end-position: ** 428049 * centisome-position: ** 52.15931...")
(Created page with "Category:gene == Gene SJ19146 == * transcription-direction: ** negative * right-end-position: ** 116200 * left-end-position: ** 110958 * centisome-position: ** 17.342255...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09367 ==
+
== Gene SJ19146 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 440879
+
** 116200
 
* left-end-position:
 
* left-end-position:
−
** 428049
+
** 110958
 
* centisome-position:
 
* centisome-position:
−
** 52.15931    
+
** 17.342255    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-10642]]
+
* [[3.4.25.1-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=negative}}
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=116200}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=110958}}
−
* [[UROGENDECARBOX-RXN]]
+
{{#set: centisome-position=17.342255   }}
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[PWY-7766]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[CHLOROPHYLL-SYN]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[HEME-BIOSYNTHESIS-II]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY0-1415]]
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5531]]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[HEMESYN2-PWY]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7159]]
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=440879}}
 
−
{{#set: left-end-position=428049}}
 
−
{{#set: centisome-position=52.15931   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=7}}
 

Latest revision as of 11:02, 18 March 2021

Gene SJ19146

  • transcription-direction:
    • negative
  • right-end-position:
    • 116200
  • left-end-position:
    • 110958
  • centisome-position:
    • 17.342255

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19146&oldid=132716"