Difference between revisions of "SJ19165"

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(Created page with "Category:gene == Gene SJ08422 == * transcription-direction: ** positive * right-end-position: ** 326425 * left-end-position: ** 302927 * centisome-position: ** 68.64703...")
(Created page with "Category:gene == Gene SJ09370 == * transcription-direction: ** negative * right-end-position: ** 487330 * left-end-position: ** 478266 * centisome-position: ** 58.27843...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08422 ==
+
== Gene SJ09370 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 326425
+
** 487330
 
* left-end-position:
 
* left-end-position:
−
** 302927
+
** 478266
 
* centisome-position:
 
* centisome-position:
−
** 68.64703    
+
** 58.27843    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEROXID-RXN]]
+
* [[RXN-10642]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14240]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[UROGENDECARBOX-RXN]]
−
* [[RXN-15288]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8635]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
* [[PWY-7766]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7445]]
+
* [[CHLOROPHYLL-SYN]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5466]]
+
* [[HEME-BIOSYNTHESIS-II]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6824]]
+
* [[PWY0-1415]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''5''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5469]]
+
* [[PWY-5531]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5461]]
+
* [[HEMESYN2-PWY]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7159]]
−
{{#set: right-end-position=326425}}
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=302927}}
+
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=68.64703   }}
+
{{#set: right-end-position=487330}}
 +
{{#set: left-end-position=478266}}
 +
{{#set: centisome-position=58.27843   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=7}}

Revision as of 13:07, 14 January 2021

Gene SJ09370

  • transcription-direction:
    • negative
  • right-end-position:
    • 487330
  • left-end-position:
    • 478266
  • centisome-position:
    • 58.27843

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7766
    • 3 reactions found over 5 reactions in the full pathway
  • CHLOROPHYLL-SYN
    • 6 reactions found over 9 reactions in the full pathway
  • HEME-BIOSYNTHESIS-II
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1415
    • 5 reactions found over 4 reactions in the full pathway
  • PWY-5531
    • 4 reactions found over 9 reactions in the full pathway
  • HEMESYN2-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7159
    • 5 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19165&oldid=84405"