Difference between revisions of "SJ19170"
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(Created page with "Category:gene == Gene SJ04564 == * transcription-direction: ** positive * right-end-position: ** 21577 * left-end-position: ** 5943 * centisome-position: ** 5.64618 ==...") |
(Created page with "Category:gene == Gene SJ19170 == * transcription-direction: ** positive * right-end-position: ** 572829 * left-end-position: ** 570794 * centisome-position: ** 89.21263...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ19170 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 572829 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 570794 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 89.21263 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[4.99.1.3-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[PROTOHEMEFERROCHELAT-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-8759]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | * [[SIROHEME-FERROCHELAT-RXN]] |
| − | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7377]] |
| − | ** ''' | + | ** '''4''' reactions found over '''15''' reactions in the full pathway |
| − | * [[ | + | * [[HEME-BIOSYNTHESIS-II]] |
| − | ** ''' | + | ** '''4''' reactions found over '''4''' reactions in the full pathway |
| − | * [[PWY | + | * [[PWY0-1415]] |
| − | ** ''' | + | ** '''5''' reactions found over '''n.a''' reactions in the full pathway |
| − | * [[PWY- | + | * [[HEMESYN2-PWY]] |
| − | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
| + | * [[PWY-5194]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=572829}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=570794}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=89.21263 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=5}} |
Latest revision as of 11:03, 18 March 2021
Contents
Gene SJ19170
- transcription-direction:
- positive
- right-end-position:
- 572829
- left-end-position:
- 570794
- centisome-position:
- 89.21263
Organism(s) associated with this gene
Reaction(s) associated
- 4.99.1.3-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- PROTOHEMEFERROCHELAT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-8759
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- SIROHEME-FERROCHELAT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7377
- 4 reactions found over 15 reactions in the full pathway
- HEME-BIOSYNTHESIS-II
- 4 reactions found over 4 reactions in the full pathway
- PWY0-1415
- 5 reactions found over n.a reactions in the full pathway
- HEMESYN2-PWY
- 3 reactions found over 4 reactions in the full pathway
- PWY-5194
- 4 reactions found over 4 reactions in the full pathway
