Difference between revisions of "SJ19194"

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(Created page with "Category:gene == Gene SJ22095 == * transcription-direction: ** negative * right-end-position: ** 158325 * left-end-position: ** 131038 * centisome-position: ** 72.50364...")
(Created page with "Category:gene == Gene SJ19194 == * transcription-direction: ** positive * right-end-position: ** 78523 * left-end-position: ** 44730 * centisome-position: ** 19.375715...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ22095 ==
+
== Gene SJ19194 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 158325
+
** 78523
 
* left-end-position:
 
* left-end-position:
−
** 131038
+
** 44730
 
* centisome-position:
 
* centisome-position:
−
** 72.50364    
+
** 19.375715    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ASNSYNA-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ARYL-SULFOTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-10614]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ASNSYNB-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-10615]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLUTAMIN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[RXN-10777]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10782]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11058]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11059]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15587]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15588]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15589]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN6666-9]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[ASPARAGINESYN-PWY]]
+
* [[PWY-6261]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''10''' reactions found over '''15''' reactions in the full pathway
−
* [[ASPARAGINE-BIOSYNTHESIS]]
+
* [[PWY-6313]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[CITRULBIO-PWY]]
+
* [[PWY-6398]]
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[GLUTAMINDEG-PWY]]
+
* [[PWY6666-2]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=158325}}
+
{{#set: right-end-position=78523}}
−
{{#set: left-end-position=131038}}
+
{{#set: left-end-position=44730}}
−
{{#set: centisome-position=72.50364   }}
+
{{#set: centisome-position=19.375715   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=11}}
 
{{#set: nb pathway associated=4}}
 
{{#set: nb pathway associated=4}}

Revision as of 14:47, 5 January 2021

Gene SJ19194

  • transcription-direction:
    • positive
  • right-end-position:
    • 78523
  • left-end-position:
    • 44730
  • centisome-position:
    • 19.375715

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6261
    • 10 reactions found over 15 reactions in the full pathway
  • PWY-6313
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-6398
    • 5 reactions found over 5 reactions in the full pathway
  • PWY6666-2
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19194&oldid=55659"