Difference between revisions of "SJ19199"

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(Created page with "Category:gene == Gene SJ12148 == * transcription-direction: ** positive * right-end-position: ** 113423 * left-end-position: ** 106581 * centisome-position: ** 29.480053...")
 
(Created page with "Category:gene == Gene SJ19199 == * transcription-direction: ** negative * right-end-position: ** 186308 * left-end-position: ** 162522 * centisome-position: ** 70.43085...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12148 ==
+
== Gene SJ19199 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 113423
+
** 186308
 
* left-end-position:
 
* left-end-position:
−
** 106581
+
** 162522
 
* centisome-position:
 
* centisome-position:
−
** 29.480053    
+
** 70.43085    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[CDPDIGLYSYN-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** Category: [[orthology]]
+
* [[3.1.1.23-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DIACYLGLYKIN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12959]]
+
* [[3.1.1.64-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15091]]
+
* [[CARBOXYLESTERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5515]]
+
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10711]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10767]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12252]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12575]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15088]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-15089]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNQT-4366]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5981]]
+
* [[LIPAS-PWY]]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY0-1319]]
+
* [[PWY-6303]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5667]]
+
* [[PWY-6857]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7817]]
 
−
** '''6''' reactions found over '''16''' reactions in the full pathway
 
−
* [[PWY-7039]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[TRIGLSYN-PWY]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
* [[PWY-7420]]
 
* [[PWY-7420]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=113423}}
+
{{#set: right-end-position=186308}}
−
{{#set: left-end-position=106581}}
+
{{#set: left-end-position=162522}}
−
{{#set: centisome-position=29.480053   }}
+
{{#set: centisome-position=70.43085   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=11}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:08, 18 March 2021

Gene SJ19199

  • transcription-direction:
    • negative
  • right-end-position:
    • 186308
  • left-end-position:
    • 162522
  • centisome-position:
    • 70.43085

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • LIPAS-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7420
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19199&oldid=135217"