Difference between revisions of "SJ19201"

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(Created page with "Category:gene == Gene SJ16423 == * transcription-direction: ** negative * right-end-position: ** 380320 * left-end-position: ** 370176 * centisome-position: ** 53.82116...")
(Created page with "Category:gene == Gene SJ19201 == * transcription-direction: ** negative * right-end-position: ** 220230 * left-end-position: ** 194043 * centisome-position: ** 84.09085...")
 
(One intermediate revision by the same user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16423 ==
+
== Gene SJ19201 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 380320
+
** 220230
 
* left-end-position:
 
* left-end-position:
−
** 370176
+
** 194043
 
* centisome-position:
 
* centisome-position:
−
** 53.82116    
+
** 84.09085    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[2-KETO-ADIPATE-DEHYDROG-RXN]]
−
* [[3.1.1.64-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[AKGDHe2r]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-1147]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[3.1.1.73-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[CARBOXYLESTERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10711]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10767]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12252]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12575]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXNQT-4366]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6784]]
+
* [[PWY-5652]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6303]]
+
* [[PWY66-425]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6857]]
+
* [[LYSINE-DEG1-PWY]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5084]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY66-398]]
 +
** '''10''' reactions found over '''10''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=380320}}
+
{{#set: right-end-position=220230}}
−
{{#set: left-end-position=370176}}
+
{{#set: left-end-position=194043}}
−
{{#set: centisome-position=53.82116   }}
+
{{#set: centisome-position=84.09085   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:07, 18 March 2021

Gene SJ19201

  • transcription-direction:
    • negative
  • right-end-position:
    • 220230
  • left-end-position:
    • 194043
  • centisome-position:
    • 84.09085

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5652
    • 2 reactions found over 5 reactions in the full pathway
  • PWY66-425
    • 1 reactions found over 9 reactions in the full pathway
  • LYSINE-DEG1-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5084
    • 3 reactions found over 3 reactions in the full pathway
  • PWY66-398
    • 10 reactions found over 10 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19201&oldid=135098"