Difference between revisions of "SJ19310"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE] == * common-name:...")
 
(Created page with "Category:gene == Gene SJ19310 == * transcription-direction: ** negative * right-end-position: ** 190464 * left-end-position: ** 180889 * centisome-position: ** 79.16714...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE] ==
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== Gene SJ19310 ==
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* common-name:
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* transcription-direction:
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** 5-amino-1-(5-phospho-d-ribosyl)imidazole-4-carboxylate
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** negative
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* smiles:
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* right-end-position:
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** c(op([o-])([o-])=o)c2(c(o)c(o)c(n1(c=nc(c([o-])=o)=c(n)1))o2)
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** 190464
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* inchi-key:
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* left-end-position:
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** xfvulmdjzxymsg-ziyngmlesa-k
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** 180889
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* molecular-weight:
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* centisome-position:
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** 336.174
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** 79.16714   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[AIRCARBOXY-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[SAICARSYN-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[PROTOHEMEFERROCHELAT-RXN]]
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* [[AIRCARBOXY-RXN]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=5-amino-1-(5-phospho-d-ribosyl)imidazole-4-carboxylate}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=xfvulmdjzxymsg-ziyngmlesa-k}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=336.174}}
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-17518]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[HEME-BIOSYNTHESIS-II]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[PWY0-1415]]
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** '''5''' reactions found over '''n.a''' reactions in the full pathway
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* [[HEMESYN2-PWY]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7766]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=190464}}
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{{#set: left-end-position=180889}}
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{{#set: centisome-position=79.16714    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:02, 18 March 2021

Gene SJ19310

  • transcription-direction:
    • negative
  • right-end-position:
    • 190464
  • left-end-position:
    • 180889
  • centisome-position:
    • 79.16714

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • HEME-BIOSYNTHESIS-II
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1415
    • 5 reactions found over n.a reactions in the full pathway
  • HEMESYN2-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7766
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19310&oldid=132336"