Difference between revisions of "SJ19317"

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(Created page with "Category:gene == Gene SJ20077 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * NARINGENIN-CHALCONE-SYNT...")
(Created page with "Category:gene == Gene SJ19317 == * transcription-direction: ** positive * right-end-position: ** 101137 * left-end-position: ** 87989 * centisome-position: ** 38.508907...")
 
(One intermediate revision by the same user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20077 ==
+
== Gene SJ19317 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 101137
 +
* left-end-position:
 +
** 87989
 +
* centisome-position:
 +
** 38.508907   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[NARINGENIN-CHALCONE-SYNTHASE-RXN]]
+
* [[ETHANOLAMINEPHOSPHOTRANSFERASE-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN-17731]]
−
* [[RXN-7645]]
+
** Category: [[annotation]]
−
** Category: [[orthology]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN-17733]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-5781]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-578]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6787]]
+
* [[PWY4FS-6]]
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY1F-FLAVSYN]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5135]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7397]]
 
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6316]]
+
* [[PWY-7782]]
 +
** '''11''' reactions found over '''16''' reactions in the full pathway
 +
* [[PWY-6804]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7897]]
+
* [[PWY-3561]]
−
** '''3''' reactions found over '''15''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5059]]
+
* [[PWY4FS-2]]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY3O-450]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7367]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=101137}}
 +
{{#set: left-end-position=87989}}
 +
{{#set: centisome-position=38.508907    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
 
{{#set: nb pathway associated=7}}
 
{{#set: nb pathway associated=7}}

Latest revision as of 11:04, 18 March 2021

Gene SJ19317

  • transcription-direction:
    • positive
  • right-end-position:
    • 101137
  • left-end-position:
    • 87989
  • centisome-position:
    • 38.508907

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY4FS-6
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway
  • PWY-6804
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-3561
    • 3 reactions found over 3 reactions in the full pathway
  • PWY4FS-2
    • 2 reactions found over 5 reactions in the full pathway
  • PWY3O-450
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7367
    • 1 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19317&oldid=133212"