Difference between revisions of "SJ19334"

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(Created page with "Category:gene == Gene SJ11687 == * transcription-direction: ** positive * right-end-position: ** 348307 * left-end-position: ** 338918 * centisome-position: ** 91.77557...")
(Created page with "Category:gene == Gene SJ12405 == * transcription-direction: ** negative * right-end-position: ** 215448 * left-end-position: ** 205069 * centisome-position: ** 57.246822...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11687 ==
+
== Gene SJ12405 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 348307
+
** 215448
 
* left-end-position:
 
* left-end-position:
−
** 338918
+
** 205069
 
* centisome-position:
 
* centisome-position:
−
** 91.77557    
+
** 57.246822    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RIBULP3EPIM-RXN]]
+
* [[ARGDECARBOX-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[GLUTDECARBOX-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-1861]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-6305]]
−
* [[P21-PWY]]
+
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1299]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-40]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6834]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[ARGDEG-III-PWY]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[NONOXIPENT-PWY]]
+
* [[PWY0-823]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-5723]]
+
* [[PWY-43]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[P124-PWY]]
+
* [[PWY0-1305]]
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[CALVIN-PWY]]
+
* [[GLUDEG-I-PWY]]
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[P122-PWY]]
+
* [[PWY-4321]]
−
** '''16''' reactions found over '''18''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[P185-PWY]]
+
</div>
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
{{#set: transcription-direction=positive}}
+
{{#set: right-end-position=215448}}
−
{{#set: right-end-position=348307}}
+
{{#set: left-end-position=205069}}
−
{{#set: left-end-position=338918}}
+
{{#set: centisome-position=57.246822   }}
−
{{#set: centisome-position=91.77557   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=10}}

Revision as of 09:26, 27 August 2019

Gene SJ12405

  • transcription-direction:
    • negative
  • right-end-position:
    • 215448
  • left-end-position:
    • 205069
  • centisome-position:
    • 57.246822

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6305
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1299
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-40
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6834
    • 2 reactions found over 4 reactions in the full pathway
  • ARGDEG-III-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-823
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-43
    • 3 reactions found over 3 reactions in the full pathway
  • PWY0-1305
    • 1 reactions found over 1 reactions in the full pathway
  • GLUDEG-I-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-4321
    • 3 reactions found over 5 reactions in the full pathway




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