Difference between revisions of "SJ19385"

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(Created page with "Category:metabolite == Metabolite GLN == * common-name: ** l-glutamine * smiles: ** c(=o)(n)ccc([n+])c([o-])=o * inchi-key: ** zdxpyrjpndtmrx-vkhmyheasa-n * molecular-weig...")
(Created page with "Category:gene == Gene SJ19385 == * transcription-direction: ** negative * right-end-position: ** 52622 * left-end-position: ** 23234 * centisome-position: ** 10.215666...")
 
(2 intermediate revisions by 2 users not shown)
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[[Category:metabolite]]
+
[[Category:gene]]
== Metabolite GLN ==
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== Gene SJ19385 ==
* common-name:
+
* transcription-direction:
** l-glutamine
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** negative
* smiles:
+
* right-end-position:
** c(=o)(n)ccc([n+])c([o-])=o
+
** 52622
* inchi-key:
+
* left-end-position:
** zdxpyrjpndtmrx-vkhmyheasa-n
+
** 23234
* molecular-weight:
+
* centisome-position:
** 146.146
+
** 10.215666   
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[S.japonica_carotenoid_curated]]
* [[2.6.1.64-RXN]]
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== Reaction(s) associated ==
* [[6.3.5.6-RXN]]
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* [[RXN-15556]]
* [[6.3.5.7-RXN]]
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** Category: [[orthology]]
* [[ANTHRANSYN-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[ASNSYNB-RXN]]
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
* [[CARBPSYN-RXN]]
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** Category: [[annotation]]
* [[CTPSYN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[FGAMSYN-RXN]]
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** Category: [[orthology]]
* [[GLUTAMATE-SYNTHASE-FERREDOXIN-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[GLUTAMATE-SYNTHASE-NADH-RXN]]
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== Pathway(s) associated ==
* [[GLUTAMATESYN-RXN]]
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* [[PWY-7511]]
* [[GLUTAMIDOTRANS-RXN]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
* [[GLUTAMIN-RXN]]
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{{#set: transcription-direction=negative}}
* [[GLUTAMINE--TRNA-LIGASE-RXN]]
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{{#set: right-end-position=52622}}
* [[GMP-SYN-GLUT-RXN]]
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{{#set: left-end-position=23234}}
* [[L-GLN-FRUCT-6-P-AMINOTRANS-RXN]]
+
{{#set: centisome-position=10.215666    }}
* [[NAD-SYNTH-GLN-RXN]]
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{{#set: organism associated=S.japonica_carotenoid_curated}}
* [[PABASYN-RXN]]
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{{#set: nb reaction associated=2}}
* [[PRPPAMIDOTRANS-RXN]]
+
{{#set: nb pathway associated=1}}
* [[RXN-11322]]
 
* [[biomass_rxn]]
 
</div>
 
== Reaction(s) known to produce the compound ==
 
* [[2.6.1.64-RXN]]
 
* [[ANTHRANSYN-RXN]]
 
* [[GLUTAMINESYN-RXN]]
 
* [[L-GLN-FRUCT-6-P-AMINOTRANS-RXN]]
 
* [[PABASYN-RXN]]
 
* [[PRPPAMIDOTRANS-RXN]]
 
* [[RXN0-6976]]
 
* [[RXN0-6983]]
 
== Reaction(s) of unknown directionality ==
 
{{#set: common-name=l-glutamine}}
 
{{#set: inchi-key=inchikey=zdxpyrjpndtmrx-vkhmyheasa-n}}
 
{{#set: molecular-weight=146.146}}
 

Latest revision as of 11:10, 18 March 2021

Gene SJ19385

  • transcription-direction:
    • negative
  • right-end-position:
    • 52622
  • left-end-position:
    • 23234
  • centisome-position:
    • 10.215666

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway