Difference between revisions of "SJ19405"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ12670 == * transcription-direction: ** negative * right-end-position: ** 89698 * left-end-position: ** 50762 * centisome-position: ** 14.256387...")
(Created page with "Category:gene == Gene SJ16900 == * transcription-direction: ** positive * right-end-position: ** 108822 * left-end-position: ** 105489 * centisome-position: ** 38.263493...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12670 ==
+
== Gene SJ16900 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 89698
+
** 108822
 
* left-end-position:
 
* left-end-position:
−
** 50762
+
** 105489
 
* centisome-position:
 
* centisome-position:
−
** 14.256387    
+
** 38.263493    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
+
* [[5.99.1.2-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[BIOTIN-CARBOXYL-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[DALADALALIG-RXN]]
+
{{#set: transcription-direction=positive}}
−
** Category: [[annotation]]
+
{{#set: right-end-position=108822}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=105489}}
−
* [[PCr]]
+
{{#set: centisome-position=38.263493   }}
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PYRUVATE-CARBOXYLASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[PWY-7388]]
 
−
** '''7''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6679]]
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5744]]
 
−
** '''4''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5743]]
 
−
** '''5''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5789]]
 
−
** '''8''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY0-1264]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7953]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6386]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-6387]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5750]]
 
−
** '''3''' reactions found over '''2''' reactions in the full pathway
 
−
* [[P42-PWY]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6146]]
 
−
** '''9''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6142]]
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=89698}}
 
−
{{#set: left-end-position=50762}}
 
−
{{#set: centisome-position=14.256387   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=14}}
 

Revision as of 11:11, 15 January 2021

Gene SJ16900

  • transcription-direction:
    • positive
  • right-end-position:
    • 108822
  • left-end-position:
    • 105489
  • centisome-position:
    • 38.263493

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19405&oldid=109892"