Difference between revisions of "SJ19405"

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(Created page with "Category:gene == Gene SJ15690 == * transcription-direction: ** negative * right-end-position: ** 105614 * left-end-position: ** 87887 * centisome-position: ** 30.019947...")
(Created page with "Category:gene == Gene SJ19405 == * transcription-direction: ** positive * right-end-position: ** 570454 * left-end-position: ** 557698 * centisome-position: ** 87.968735...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15690 ==
+
== Gene SJ19405 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 105614
+
** 570454
 
* left-end-position:
 
* left-end-position:
−
** 87887
+
** 557698
 
* centisome-position:
 
* centisome-position:
−
** 30.019947    
+
** 87.968735    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
* [[ATCY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[AUPT]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DATCY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DATUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DCTCP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DCTUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DGTCY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DGTUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DTTGY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DTTUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DUTCP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DUTUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GTCY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GTUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ITCY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ITUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[URIDINEKIN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[URKI-RXN]]
+
* [[RXN3DJ-25]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[UTCY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[UTUP]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7193]]
+
* [[PWY3DJ-11470]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''10''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=105614}}
+
{{#set: right-end-position=570454}}
−
{{#set: left-end-position=87887}}
+
{{#set: left-end-position=557698}}
−
{{#set: centisome-position=30.019947   }}
+
{{#set: centisome-position=87.968735   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=20}}
+
{{#set: nb reaction associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}

Latest revision as of 11:09, 18 March 2021

Gene SJ19405

  • transcription-direction:
    • positive
  • right-end-position:
    • 570454
  • left-end-position:
    • 557698
  • centisome-position:
    • 87.968735

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY3DJ-11470
    • 3 reactions found over 10 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19405&oldid=135936"