Difference between revisions of "SJ19405"

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(Created page with "Category:gene == Gene SJ15690 == * transcription-direction: ** negative * right-end-position: ** 105614 * left-end-position: ** 87887 * centisome-position: ** 30.019947...")
(Created page with "Category:gene == Gene SJ12670 == * transcription-direction: ** negative * right-end-position: ** 89698 * left-end-position: ** 50762 * centisome-position: ** 14.256387...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15690 ==
+
== Gene SJ12670 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 105614
+
** 89698
 
* left-end-position:
 
* left-end-position:
−
** 87887
+
** 50762
 
* centisome-position:
 
* centisome-position:
−
** 30.019947    
+
** 14.256387    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
−
* [[ATCY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[AUPT]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DATCY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DATUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DCTCP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DCTUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DGTCY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DGTUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DTTGY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DTTUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DUTCP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[DUTUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GTCY]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[GTUP]]
+
* [[BIOTIN-CARBOXYL-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ITCY]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ITUP]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[URIDINEKIN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[URKI-RXN]]
+
* [[DALADALALIG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[UTCY]]
+
* [[PCr]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[UTUP]]
+
* [[PYRUVATE-CARBOXYLASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-7388]]
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6679]]
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5744]]
 +
** '''4''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5743]]
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5789]]
 +
** '''8''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY0-1264]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7953]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6386]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6387]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5750]]
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 +
* [[P42-PWY]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY66-399]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-6146]]
 +
** '''9''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6142]]
 +
** '''10''' reactions found over '''13''' reactions in the full pathway
 
</div>
 
</div>
−
== Pathway(s) associated ==
 
−
* [[PWY-7193]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=105614}}
+
{{#set: right-end-position=89698}}
−
{{#set: left-end-position=87887}}
+
{{#set: left-end-position=50762}}
−
{{#set: centisome-position=30.019947   }}
+
{{#set: centisome-position=14.256387   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=20}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=14}}

Revision as of 18:51, 14 January 2021

Gene SJ12670

  • transcription-direction:
    • negative
  • right-end-position:
    • 89698
  • left-end-position:
    • 50762
  • centisome-position:
    • 14.256387

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7388
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-6679
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY0-1264
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7953
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6386
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6387
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5750
    • 3 reactions found over 2 reactions in the full pathway
  • P42-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-6146
    • 9 reactions found over 2 reactions in the full pathway
  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway




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