Difference between revisions of "SJ19412"

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(Created page with "Category:gene == Gene SJ13485 == * transcription-direction: ** negative * right-end-position: ** 119369 * left-end-position: ** 102412 * centisome-position: ** 30.516636...")
 
(Created page with "Category:gene == Gene SJ19412 == * transcription-direction: ** negative * right-end-position: ** 119670 * left-end-position: ** 113189 * centisome-position: ** 17.853914...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13485 ==
+
== Gene SJ19412 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 119369
+
** 119670
 
* left-end-position:
 
* left-end-position:
−
** 102412
+
** 113189
 
* centisome-position:
 
* centisome-position:
−
** 30.516636    
+
** 17.853914    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[NADH-DEHYDROG-A-RXN]]
−
* [[RXN-12587]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12588]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14382]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14384]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14385]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-14386]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-15881]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-9787]]
+
* [[NADH-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-308]]
+
* [[RXN0-5330]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[SELENOCYSTEINE-LYASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY-6892]]
+
* [[PWY0-1335]]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7250]]
+
* [[PWY-4302]]
−
** '''5''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6891]]
+
* [[PWY-3781]]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY0-1021]]
+
* [[PWY0-1334]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6823]]
+
* [[PWY-6692]]
−
** '''7''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7904]]
+
* [[PWY-5083]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7892]]
+
* [[PWY0-1573]]
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7891]]
+
* [[PWY-7269]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7889]]
+
* [[PWY0-1568]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7888]]
+
* [[PWY0-1567]]
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7279]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
</div>
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=119369}}
+
{{#set: right-end-position=119670}}
−
{{#set: left-end-position=102412}}
+
{{#set: left-end-position=113189}}
−
{{#set: centisome-position=30.516636   }}
+
{{#set: centisome-position=17.853914   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=10}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=10}}
+
{{#set: nb pathway associated=11}}

Latest revision as of 11:06, 18 March 2021

Gene SJ19412

  • transcription-direction:
    • negative
  • right-end-position:
    • 119670
  • left-end-position:
    • 113189
  • centisome-position:
    • 17.853914

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1335
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-4302
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3781
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1334
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6692
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-5083
    • 5 reactions found over 6 reactions in the full pathway
  • PWY0-1573
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7269
    • 5 reactions found over 5 reactions in the full pathway
  • PWY0-1568
    • 1 reactions found over 2 reactions in the full pathway
  • PWY0-1567
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7279
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19412&oldid=134404"