Difference between revisions of "SJ19412"

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(Created page with "Category:gene == Gene SJ22603 == * transcription-direction: ** positive * right-end-position: ** 31537 * left-end-position: ** 8447 * centisome-position: ** 4.8868394...")
(Created page with "Category:gene == Gene SJ20325 == * transcription-direction: ** negative * right-end-position: ** 37017 * left-end-position: ** 15277 * centisome-position: ** 7.2994413...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ22603 ==
+
== Gene SJ20325 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 31537
+
** 37017
 
* left-end-position:
 
* left-end-position:
−
** 8447
+
** 15277
 
* centisome-position:
 
* centisome-position:
−
** 4.8868394    
+
** 7.2994413    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[2.5.1.64-RXN]]
+
* [[4.1.99.4-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ISOCHORSYN-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[PEROXID-RXN]]
+
* [[DCYSDESULF-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14240]]
+
* [[RXN-15149]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-15288]]
+
* [[RXN0-2381]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-17352]]
+
* [[RXN0-2382]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-8635]]
+
* [[TRYPSYN-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5837]]
+
* [[PWY-6949]]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6406]]
+
* [[TRPSYN-PWY]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5901]]
+
{{#set: transcription-direction=negative}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=37017}}
−
* [[PWY-7214]]
+
{{#set: left-end-position=15277}}
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: centisome-position=7.2994413   }}
−
* [[PWY-7445]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
{{#set: nb reaction associated=6}}
−
* [[PWY-5466]]
+
{{#set: nb pathway associated=2}}
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-6824]]
 
−
** '''2''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-5469]]
 
−
** '''2''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5461]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=31537}}
 
−
{{#set: left-end-position=8447}}
 
−
{{#set: centisome-position=4.8868394   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=7}}
 
−
{{#set: nb pathway associated=9}}
 

Revision as of 14:49, 5 January 2021

Gene SJ20325

  • transcription-direction:
    • negative
  • right-end-position:
    • 37017
  • left-end-position:
    • 15277
  • centisome-position:
    • 7.2994413

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6949
    • 1 reactions found over 6 reactions in the full pathway
  • TRPSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19412&oldid=56246"