Difference between revisions of "SJ19416"
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(Created page with "Category:gene == Gene SJ12139 == * transcription-direction: ** negative * right-end-position: ** 322676 * left-end-position: ** 313944 * centisome-position: ** 86.83617...") |
(Created page with "Category:gene == Gene SJ20770 == * transcription-direction: ** positive * right-end-position: ** 468741 * left-end-position: ** 465084 * centisome-position: ** 75.699486...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ20770 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 468741 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 465084 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 75.699486 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[2.7.7.14-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | == Pathway(s) associated == |
| − | {{#set: right-end-position= | + | * [[PWY4FS-6]] |
| − | {{#set: left-end-position= | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
| − | {{#set: centisome-position= | + | * [[PWY-7782]] |
| + | ** '''11''' reactions found over '''16''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=468741}} | ||
| + | {{#set: left-end-position=465084}} | ||
| + | {{#set: centisome-position=75.699486 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
| + | {{#set: nb pathway associated=2}} | ||
Revision as of 11:09, 15 January 2021
Contents
Gene SJ20770
- transcription-direction:
- positive
- right-end-position:
- 468741
- left-end-position:
- 465084
- centisome-position:
- 75.699486
Organism(s) associated with this gene
Reaction(s) associated
- 2.7.7.14-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY4FS-6
- 3 reactions found over 4 reactions in the full pathway
- PWY-7782
- 11 reactions found over 16 reactions in the full pathway
