Difference between revisions of "SJ19416"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ20770 == * transcription-direction: ** positive * right-end-position: ** 468741 * left-end-position: ** 465084 * centisome-position: ** 75.699486...")
(Created page with "Category:gene == Gene SJ19416 == * transcription-direction: ** negative * right-end-position: ** 115333 * left-end-position: ** 110906 * centisome-position: ** 48.79794...")
 
(One intermediate revision by one other user not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ20770 ==
+
== Gene SJ19416 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 468741
+
** 115333
 
* left-end-position:
 
* left-end-position:
** 465084
+
** 110906
 
* centisome-position:
 
* centisome-position:
** 75.699486    
+
** 48.79794    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[2.7.7.14-RXN]]
+
* [[RXN-15556]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY4FS-6]]
+
* [[PWY-7511]]
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
* [[PWY-7782]]
+
{{#set: transcription-direction=negative}}
** '''11''' reactions found over '''16''' reactions in the full pathway
+
{{#set: right-end-position=115333}}
{{#set: transcription-direction=positive}}
+
{{#set: left-end-position=110906}}
{{#set: right-end-position=468741}}
+
{{#set: centisome-position=48.79794   }}
{{#set: left-end-position=465084}}
 
{{#set: centisome-position=75.699486   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:08, 18 March 2021

Gene SJ19416

  • transcription-direction:
    • negative
  • right-end-position:
    • 115333
  • left-end-position:
    • 110906
  • centisome-position:
    • 48.79794

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway