Difference between revisions of "SJ19426"
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(Created page with "Category:gene == Gene SJ12640 == * transcription-direction: ** positive * right-end-position: ** 35151 * left-end-position: ** 12603 * centisome-position: ** 3.533984...") |
(Created page with "Category:gene == Gene SJ19426 == * transcription-direction: ** negative * right-end-position: ** 55697 * left-end-position: ** 50829 * centisome-position: ** 22.364437...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ19426 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 55697 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 50829 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 22.364437 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[4-NITROPHENYLPHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[GLYCEROL-1-PHOSPHATASE-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RIBOFLAVINKIN-RXN]] | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[RXN- | + | * [[RXN-14964]] |
| − | ** Category: [[ | + | ** Category: [[annotation]] |
| − | *** source: [[ | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| + | * [[RXN-14965]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-15703]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[RIBOSYN2-PWY]] |
| − | ** ''' | + | ** '''8''' reactions found over '''9''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY66-366]] |
| − | {{#set: right-end-position= | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-7863]] |
| − | {{#set: centisome-position= | + | ** '''1''' reactions found over '''7''' reactions in the full pathway |
| + | * [[PWY-5523]] | ||
| + | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-6168]] | ||
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7385]] | ||
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=55697}} | ||
| + | {{#set: left-end-position=50829}} | ||
| + | {{#set: centisome-position=22.364437 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=6}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Latest revision as of 11:07, 18 March 2021
Contents
Gene SJ19426
- transcription-direction:
- negative
- right-end-position:
- 55697
- left-end-position:
- 50829
- centisome-position:
- 22.364437
Organism(s) associated with this gene
Reaction(s) associated
- 4-NITROPHENYLPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GLYCEROL-1-PHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RIBOFLAVINKIN-RXN
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-14964
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-14965
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-15703
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- RIBOSYN2-PWY
- 8 reactions found over 9 reactions in the full pathway
- PWY66-366
- 2 reactions found over 2 reactions in the full pathway
- PWY-7863
- 1 reactions found over 7 reactions in the full pathway
- PWY-5523
- 1 reactions found over 3 reactions in the full pathway
- PWY-6168
- 7 reactions found over 9 reactions in the full pathway
- PWY-7385
- 7 reactions found over 9 reactions in the full pathway
