Difference between revisions of "SJ19426"

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(Created page with "Category:gene == Gene SJ12574 == * transcription-direction: ** positive * right-end-position: ** 114440 * left-end-position: ** 102698 * centisome-position: ** 28.711775...")
(Created page with "Category:gene == Gene SJ19426 == * transcription-direction: ** negative * right-end-position: ** 55697 * left-end-position: ** 50829 * centisome-position: ** 22.364437...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12574 ==
+
== Gene SJ19426 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 114440
+
** 55697
 
* left-end-position:
 
* left-end-position:
−
** 102698
+
** 50829
 
* centisome-position:
 
* centisome-position:
−
** 28.711775    
+
** 22.364437    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
−
* [[ALCOHOL-DEHYDROGENASE-NADP+-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[ALCOHOL-DEHYDROGENASE-NADPORNOP+-RXN]]
+
* [[GLYCEROL-1-PHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RETINOL-DEHYDROGENASE-RXN]]
+
* [[RIBOFLAVINKIN-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RIBITOL-2-DEHYDROGENASE-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-10717]]
+
* [[RXN-14964]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10841]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12484]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12581]]
+
* [[RXN-14965]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14023]]
+
* [[RXN-15703]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[RIBITOLUTIL-PWY]]
+
* [[RIBOSYN2-PWY]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6307]]
+
* [[PWY66-366]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6857]]
+
* [[PWY-7863]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-6861]]
+
* [[PWY-5523]]
−
** '''1''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6872]]
+
* [[PWY-6168]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7178]]
+
* [[PWY-7385]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=114440}}
+
{{#set: right-end-position=55697}}
−
{{#set: left-end-position=102698}}
+
{{#set: left-end-position=50829}}
−
{{#set: centisome-position=28.711775   }}
+
{{#set: centisome-position=22.364437   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=6}}
 
{{#set: nb pathway associated=6}}
 
{{#set: nb pathway associated=6}}

Latest revision as of 11:07, 18 March 2021

Gene SJ19426

  • transcription-direction:
    • negative
  • right-end-position:
    • 55697
  • left-end-position:
    • 50829
  • centisome-position:
    • 22.364437

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY66-366
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7863
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-5523
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6168
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-7385
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19426&oldid=135063"