Difference between revisions of "SJ19426"

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(Created page with "Category:gene == Gene SJ17520 == * transcription-direction: ** positive * right-end-position: ** 147627 * left-end-position: ** 120981 * centisome-position: ** 46.420635...")
(Created page with "Category:gene == Gene SJ12574 == * transcription-direction: ** positive * right-end-position: ** 114440 * left-end-position: ** 102698 * centisome-position: ** 28.711775...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17520 ==
+
== Gene SJ12574 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 147627
+
** 114440
 
* left-end-position:
 
* left-end-position:
−
** 120981
+
** 102698
 
* centisome-position:
 
* centisome-position:
−
** 46.420635    
+
** 28.711775    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-14177]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ALCOHOL-DEHYDROGENASE-NADP+-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ALCOHOL-DEHYDROGENASE-NADPORNOP+-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RETINOL-DEHYDROGENASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RIBITOL-2-DEHYDROGENASE-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-16889]]
+
* [[RXN-10717]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10841]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12484]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-16891]]
+
* [[RXN-12581]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17121]]
+
* [[RXN-14023]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[RIBITOLUTIL-PWY]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6307]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6857]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6861]]
 +
** '''1''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-6872]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7178]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=147627}}
+
{{#set: right-end-position=114440}}
−
{{#set: left-end-position=120981}}
+
{{#set: left-end-position=102698}}
−
{{#set: centisome-position=46.420635   }}
+
{{#set: centisome-position=28.711775   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=9}}
 +
{{#set: nb pathway associated=6}}

Revision as of 13:04, 14 January 2021

Gene SJ12574

  • transcription-direction:
    • positive
  • right-end-position:
    • 114440
  • left-end-position:
    • 102698
  • centisome-position:
    • 28.711775

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • RIBITOLUTIL-PWY
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6307
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6861
    • 1 reactions found over 12 reactions in the full pathway
  • PWY-6872
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7178
    • 1 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19426&oldid=82962"