Difference between revisions of "SJ19455"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLYCERATE GLYCERATE] == * common-name: ** d-glycerate * smiles: ** c(=o)([o-])c(o)co * inchi-ke...")
(Created page with "Category:gene == Gene SJ03227 == * transcription-direction: ** positive * right-end-position: ** 215934 * left-end-position: ** 194426 * centisome-position: ** 36.813347...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GLYCERATE GLYCERATE] ==
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== Gene SJ03227 ==
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* common-name:
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* transcription-direction:
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** d-glycerate
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** positive
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* smiles:
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* right-end-position:
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** c(=o)([o-])c(o)co
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** 215934
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* inchi-key:
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* left-end-position:
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** rbnpomfgqqghho-uwtatzphsa-m
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** 194426
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* molecular-weight:
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* centisome-position:
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** 105.07
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** 36.813347   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[GLY3KIN-RXN]]
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* [[S.japonica_sterols_curated]]
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* [[HYDROXYPYRUVATE-REDUCTASE-RXN]]
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== Reaction(s) associated ==
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* [[RXN-15115]]
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* [[ATPASE-RXN]]
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* [[RXN0-5289]]
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** Category: [[annotation]]
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* [[biomass_rxn]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) known to produce the compound ==
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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* [[HYDROXYPYRUVATE-REDUCTASE-RXN]]
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** Category: [[annotation]]
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* [[RXN-15115]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5289]]
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* [[RXN-12195]]
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* [[TSA-REDUCT-RXN]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=d-glycerate}}
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* [[RXN-12196]]
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{{#set: inchi-key=inchikey=rbnpomfgqqghho-uwtatzphsa-m}}
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** Category: [[annotation]]
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{{#set: molecular-weight=105.07}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7511]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=215934}}
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{{#set: left-end-position=194426}}
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{{#set: centisome-position=36.813347    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=5}}

Revision as of 20:19, 18 December 2020

Gene SJ03227

  • transcription-direction:
    • positive
  • right-end-position:
    • 215934
  • left-end-position:
    • 194426
  • centisome-position:
    • 36.813347

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway




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