Difference between revisions of "SJ19492"

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(Created page with "Category:gene == Gene SJ14675 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == <div class="toccolours mw-co...")
 
(Created page with "Category:gene == Gene SJ16864 == * transcription-direction: ** positive * right-end-position: ** 191161 * left-end-position: ** 184418 * centisome-position: ** 66.86609...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14675 ==
+
== Gene SJ16864 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 191161
 +
* left-end-position:
 +
** 184418
 +
* centisome-position:
 +
** 66.86609   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[NARINGENIN-3-DIOXYGENASE-RXN]]
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* [[2-OCTAPRENYL-6-OHPHENOL-METHY-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-113]]
+
* [[2.1.1.64-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-115]]
+
* [[DHHB-METHYLTRANSFER-RXN]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-171]]
+
* [[RXN-11758]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-527]]
+
* [[RXN-12160]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-602]]
+
* [[RXN-9225]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-6550]]
+
* [[RXN-9229]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7648]]
+
* [[RXN-9233]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7775]]
+
* [[RXN-9237]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-7922]]
+
* [[RXN-9240]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8450]]
+
* [[RXN3O-102]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN1F-162]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN1F-163]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN1F-165]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN1F-167]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN1F-168]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN1F-93]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[PWY1F-FLAVSYN]]
+
* [[PWY-6708]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6787]]
+
* [[PWY-5856]]
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-102]]
+
* [[PWY-5871]]
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5390]]
+
* [[PWY-5870]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-3101]]
+
* [[PWY-5855]]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5059]]
+
* [[PWY-5873]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY1F-823]]
+
* [[PWY-5857]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5152]]
+
* [[PWY-5872]]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5391]]
+
* [[PWY3O-19]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''4''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5070]]
+
* [[PWY-7230]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5035]]
+
* [[PWY-7233]]
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''10''' reactions in the full pathway
 
</div>
 
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=191161}}
 +
{{#set: left-end-position=184418}}
 +
{{#set: centisome-position=66.86609    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=17}}
+
{{#set: nb reaction associated=11}}
 
{{#set: nb pathway associated=11}}
 
{{#set: nb pathway associated=11}}

Revision as of 14:23, 26 August 2019

Gene SJ16864

  • transcription-direction:
    • positive
  • right-end-position:
    • 191161
  • left-end-position:
    • 184418
  • centisome-position:
    • 66.86609

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6708
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-5856
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5871
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5870
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-5855
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5873
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5857
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5872
    • 3 reactions found over 9 reactions in the full pathway
  • PWY3O-19
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-7230
    • 3 reactions found over 9 reactions in the full pathway
  • PWY-7233
    • 3 reactions found over 10 reactions in the full pathway




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