Difference between revisions of "SJ19533"

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(Created page with "Category:gene == Gene SJ15937 == * transcription-direction: ** negative * right-end-position: ** 97175 * left-end-position: ** 85900 * centisome-position: ** 29.683023...")
(Created page with "Category:gene == Gene SJ20689 == * transcription-direction: ** positive * right-end-position: ** 26063 * left-end-position: ** 10386 * centisome-position: ** 5.0718336...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15937 ==
+
== Gene SJ20689 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 97175
+
** 26063
 
* left-end-position:
 
* left-end-position:
−
** 85900
+
** 10386
 
* centisome-position:
 
* centisome-position:
−
** 29.683023    
+
** 5.0718336    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[3.4.22.68-RXN]]
−
* [[ACSERLY-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
+
{{#set: transcription-direction=positive}}
−
** Category: [[annotation]]
+
{{#set: right-end-position=26063}}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=10386}}
−
** Category: [[orthology]]
+
{{#set: centisome-position=5.0718336   }}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: organism associated=S.japonica_sterols_curated}}
−
* [[NITRITE-REDUCTASE-CYTOCHROME-RXN]]
+
{{#set: nb reaction associated=1}}
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12726]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15838]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[SULFOCYS-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
−
== Pathway(s) associated ==
 
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
−
* [[CYSTSYN-PWY]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[HOMOCYSDEGR-PWY]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-I9]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-801]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[P303-PWY]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6748]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6523]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7084]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6936]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[DENITRIFICATION-PWY]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7870]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=97175}}
 
−
{{#set: left-end-position=85900}}
 
−
{{#set: centisome-position=29.683023   }}
 
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
−
{{#set: nb reaction associated=6}}
 
−
{{#set: nb pathway associated=11}}
 

Revision as of 20:28, 18 December 2020

Gene SJ20689

  • transcription-direction:
    • positive
  • right-end-position:
    • 26063
  • left-end-position:
    • 10386
  • centisome-position:
    • 5.0718336

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19533&oldid=45021"