Difference between revisions of "SJ19608"

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(Created page with "Category:gene == Gene SJ21017 == * transcription-direction: ** negative * right-end-position: ** 194577 * left-end-position: ** 189532 * centisome-position: ** 94.19284...")
(Created page with "Category:gene == Gene SJ00644 == * transcription-direction: ** positive * right-end-position: ** 68682 * left-end-position: ** 57734 * centisome-position: ** 35.113735...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21017 ==
+
== Gene SJ00644 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 194577
+
** 68682
 
* left-end-position:
 
* left-end-position:
−
** 189532
+
** 57734
 
* centisome-position:
 
* centisome-position:
−
** 94.19284    
+
** 35.113735    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[NADH-DEHYDROG-A-RXN]]
+
* [[NITRATE-REDUCTASE-NADH-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[NITRATE-REDUCTASE-NADPH-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NADH-DEHYDROGENASE-RXN]]
+
* [[NITRATREDUCT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN0-5330]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-381]]
−
* [[PWY0-1335]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-4302]]
 
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-3781]]
+
* [[PWY-5675]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY0-1334]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6692]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5083]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7279]]
 
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY0-1573]]
+
{{#set: transcription-direction=positive}}
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: right-end-position=68682}}
−
* [[PWY-7269]]
+
{{#set: left-end-position=57734}}
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=35.113735   }}
−
* [[PWY0-1568]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY0-1567]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=194577}}
 
−
{{#set: left-end-position=189532}}
 
−
{{#set: centisome-position=94.19284   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=2}}

Revision as of 15:20, 5 January 2021

Gene SJ00644

  • transcription-direction:
    • positive
  • right-end-position:
    • 68682
  • left-end-position:
    • 57734
  • centisome-position:
    • 35.113735

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-381
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5675
    • 4 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19608&oldid=69213"