Difference between revisions of "SJ19610"

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(Created page with "Category:gene == Gene SJ19809 == * transcription-direction: ** positive * right-end-position: ** 147186 * left-end-position: ** 138135 * centisome-position: ** 62.824905...")
(Created page with "Category:gene == Gene SJ19008 == * transcription-direction: ** negative * right-end-position: ** 169915 * left-end-position: ** 155320 * centisome-position: ** 66.73197...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19809 ==
+
== Gene SJ19008 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 147186
+
** 169915
 
* left-end-position:
 
* left-end-position:
−
** 138135
+
** 155320
 
* centisome-position:
 
* centisome-position:
−
** 62.824905    
+
** 66.73197    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[CYTOCHROME-B5-REDUCTASE-RXN]]
−
* [[ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[ALANINE--OXO-ACID-AMINOTRANSFERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[ALANINE-AMINOTRANSFERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[D-ALANINE-AMINOTRANSFERASE-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLYCINE-AMINOTRANSFERASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-13698]]
+
* [[RXN-11195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=negative}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=169915}}
−
</div>
+
{{#set: left-end-position=155320}}
−
== Pathway(s) associated ==
+
{{#set: centisome-position=66.73197   }}
−
* [[GLYSYN-ALA-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[ALANINE-SYN2-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[ALANINE-DEG3-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[ALACAT2-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7117]]
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-7115]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7383]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-181]]
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=147186}}
 
−
{{#set: left-end-position=138135}}
 
−
{{#set: centisome-position=62.824905   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=8}}
 

Revision as of 11:09, 15 January 2021

Gene SJ19008

  • transcription-direction:
    • negative
  • right-end-position:
    • 169915
  • left-end-position:
    • 155320
  • centisome-position:
    • 66.73197

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ19610&oldid=108993"