Difference between revisions of "SJ19616"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SER SER] == * common-name: ** l-serine * smiles: ** c(o)c([n+])c(=o)[o-] * inchi-key: ** mtcfgr...")
(Created page with "Category:gene == Gene SJ19616 == * transcription-direction: ** negative * right-end-position: ** 27570 * left-end-position: ** 12993 * centisome-position: ** 5.797755...")
 
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=SER SER] ==
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== Gene SJ19616 ==
* common-name:
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* transcription-direction:
** l-serine
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** negative
* smiles:
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* right-end-position:
** c(o)c([n+])c(=o)[o-]
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** 27570
* inchi-key:
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* left-end-position:
** mtcfgrxmjlqnbg-reohclbhsa-n
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** 12993
* molecular-weight:
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* centisome-position:
** 105.093
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** 5.797755   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[4.3.1.17-RXN]]
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* [[S.japonica_carotenoid_curated]]
* [[5.1.1.18-RXN]]
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== Reaction(s) associated ==
* [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
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* [[3.1.13.1-RXN]]
* [[GLYOHMETRANS-RXN]]
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** Category: [[annotation]]
* [[PHOSPHASERSYN-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-1382]]
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* [[RXN0-4222]]
* [[RXN-15125]]
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** Category: [[annotation]]
* [[RXN0-2161]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN0-2382]]
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* [[RXN0-6479]]
* [[SERINE--TRNA-LIGASE-RXN]]
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** Category: [[annotation]]
* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[SERINE-O-ACETTRAN-RXN]]
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* [[RXN0-6524]]
* [[TRYPSYN-RXN]]
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** Category: [[annotation]]
* [[biomass_rxn]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
== Reaction(s) known to produce the compound ==
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* [[RXN0-6525]]
* [[CYSTATHIONINE-BETA-SYNTHASE-RXN]]
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** Category: [[annotation]]
* [[GLYOHMETRANS-RXN]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[PHOSPHASERSYN-RXN]]
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== Pathway(s) associated ==
* [[RXN-1382]]
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* [[PWY0-1479]]
* [[RXN-14136]]
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** '''4''' reactions found over '''10''' reactions in the full pathway
* [[RXN0-5114]]
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{{#set: transcription-direction=negative}}
== Reaction(s) of unknown directionality ==
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{{#set: right-end-position=27570}}
{{#set: common-name=l-serine}}
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{{#set: left-end-position=12993}}
{{#set: inchi-key=inchikey=mtcfgrxmjlqnbg-reohclbhsa-n}}
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{{#set: centisome-position=5.797755    }}
{{#set: molecular-weight=105.093}}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=1}}

Latest revision as of 11:04, 18 March 2021

Gene SJ19616

  • transcription-direction:
    • negative
  • right-end-position:
    • 27570
  • left-end-position:
    • 12993
  • centisome-position:
    • 5.797755

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1479
    • 4 reactions found over 10 reactions in the full pathway